STRINGSTRING
Psyr_0635 Psyr_0635 Psyr_0313 Psyr_0313 Psyr_2474 Psyr_2474 fadB fadB Psyr_1794 Psyr_1794 Psyr_2457 Psyr_2457 Psyr_0633 Psyr_0633 Psyr_0634 Psyr_0634 Psyr_1994 Psyr_1994 Psyr_0638 Psyr_0638 Psyr_0636 Psyr_0636
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0635MaoC-like dehydratase. (151 aa)    
Predicted Functional Partners:
Psyr_0313
Zinc-containing alcohol dehydrogenase superfamily.
 
 0.919
Psyr_2474
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region.
 
 0.658
fadB
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.609
Psyr_1794
Amino acid adenylation.
   
 
 0.592
Psyr_2457
Aminoglycoside phosphotransferase.
 
 
 0.571
Psyr_0633
Conserved hypothetical protein.
   
 
 0.559
Psyr_0634
MORN motif protein.
     
 0.556
Psyr_1994
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.554
Psyr_0638
Peptidase S16, lon N-terminal.
   
   0.549
Psyr_0636
LrgA.
       0.541
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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