STRINGSTRING
Psyr_0920 Psyr_0920 Psyr_0918 Psyr_0918 Psyr_0917 Psyr_0917 Psyr_0919 Psyr_0919 Psyr_0914 Psyr_0914 Psyr_0915 Psyr_0915 Psyr_0610 Psyr_0610 Psyr_0611 Psyr_0611 Psyr_3302 Psyr_3302 gmd gmd Psyr_0922 Psyr_0922
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0920Glycosyl transferase, group 1. (831 aa)    
Predicted Functional Partners:
Psyr_0918
ABC transporter.
 
 
 0.955
Psyr_0917
ABC-2.
 
  
 0.943
Psyr_0919
Chromosome segregation ATPase-like protein.
 
 
 0.939
Psyr_0914
Glycosyl transferase, group 1.
 
   
 0.784
Psyr_0915
NAD-dependent epimerase/dehydratase.
 
  
 0.716
Psyr_0610
ABC-2.
 
  
 0.652
Psyr_0611
ABC transporter.
 
 
 0.634
Psyr_3302
Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP).
 
  
 0.556
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 0.555
Psyr_0922
Glycosyl transferase, family 2.
 
 
 0.536
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.