Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_0219 | Psyr_0937 | Psyr_0219 | Psyr_0937 | Phosphomannomutase. | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | 0.966 |
Psyr_0219 | Psyr_1052 | Psyr_0219 | Psyr_1052 | Phosphomannomutase. | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | 0.967 |
Psyr_0219 | Psyr_3225 | Psyr_0219 | Psyr_3225 | Phosphomannomutase. | Protein-tyrosine kinase. | 0.526 |
Psyr_0219 | Psyr_3231 | Psyr_0219 | Psyr_3231 | Phosphomannomutase. | Sugar transferase. | 0.655 |
Psyr_0219 | Psyr_3301 | Psyr_0219 | Psyr_3301 | Phosphomannomutase. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.655 |
Psyr_0219 | Psyr_3302 | Psyr_0219 | Psyr_3302 | Phosphomannomutase. | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | 0.969 |
Psyr_0219 | pgi | Psyr_0219 | Psyr_0826 | Phosphomannomutase. | Glucose-6-phosphate isomerase. | 0.927 |
Psyr_0936 | Psyr_0937 | Psyr_0936 | Psyr_0937 | Glycosyl transferase, group 1. | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | 0.720 |
Psyr_0936 | Psyr_1052 | Psyr_0936 | Psyr_1052 | Glycosyl transferase, group 1. | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | 0.526 |
Psyr_0936 | Psyr_1063 | Psyr_0936 | Psyr_1063 | Glycosyl transferase, group 1. | GDP-mannose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.413 |
Psyr_0936 | Psyr_3231 | Psyr_0936 | Psyr_3231 | Glycosyl transferase, group 1. | Sugar transferase. | 0.549 |
Psyr_0936 | Psyr_3301 | Psyr_0936 | Psyr_3301 | Glycosyl transferase, group 1. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.565 |
Psyr_0936 | Psyr_3302 | Psyr_0936 | Psyr_3302 | Glycosyl transferase, group 1. | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | 0.581 |
Psyr_0936 | gmd | Psyr_0936 | Psyr_0916 | Glycosyl transferase, group 1. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.533 |
Psyr_0937 | Psyr_0219 | Psyr_0937 | Psyr_0219 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Phosphomannomutase. | 0.966 |
Psyr_0937 | Psyr_0936 | Psyr_0937 | Psyr_0936 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Glycosyl transferase, group 1. | 0.720 |
Psyr_0937 | Psyr_1052 | Psyr_0937 | Psyr_1052 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | 0.917 |
Psyr_0937 | Psyr_1063 | Psyr_0937 | Psyr_1063 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | GDP-mannose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.955 |
Psyr_0937 | Psyr_3225 | Psyr_0937 | Psyr_3225 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Protein-tyrosine kinase. | 0.705 |
Psyr_0937 | Psyr_3231 | Psyr_0937 | Psyr_3231 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Sugar transferase. | 0.967 |
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