STRINGSTRING
Psyr_1016 Psyr_1016 Psyr_0300 Psyr_0300 Psyr_2510 Psyr_2510 Psyr_2975 Psyr_2975 Psyr_4611 Psyr_4611 leuC leuC Psyr_4437 Psyr_4437 Psyr_4877 Psyr_4877 Psyr_3701 Psyr_3701 Psyr_4466 Psyr_4466 Psyr_0303 Psyr_0303
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1016Thioredoxin reductase. (320 aa)    
Predicted Functional Partners:
Psyr_0300
Thioredoxin; Belongs to the thioredoxin family.
 
 0.977
Psyr_2510
2-keto-3-deoxygluconate kinase.
    
 0.902
Psyr_2975
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.894
Psyr_4611
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.860
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 
 0.794
Psyr_4437
Hypothetical protein.
  
 
 0.788
Psyr_4877
1-Cys peroxiredoxin.
  
 
 0.757
Psyr_3701
Thioredoxin, putative.
  
 
 0.747
Psyr_4466
Thioredoxin.
  
 
 0.738
Psyr_0303
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein.
   
 
 0.707
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.