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Psyr_1104 Psyr_1104 Psyr_4521 Psyr_4521 Psyr_3897 Psyr_3897 Psyr_4448 Psyr_4448 hemH hemH cyoE cyoE Psyr_1105 Psyr_1105 Psyr_1103 Psyr_1103 Psyr_1106 Psyr_1106 Psyr_1107 Psyr_1107 Psyr_4730 Psyr_4730
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1104Heme oxygenase. (204 aa)    
Predicted Functional Partners:
Psyr_4521
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
  
 0.913
Psyr_3897
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.901
Psyr_4448
Ferritin and Dps.
     
 0.901
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
  0.900
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
  0.900
Psyr_1105
TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor.
 
  
 0.884
Psyr_1103
Protein of unknown function DUF454.
 
     0.854
Psyr_1106
FecR protein.
 
  
 0.826
Psyr_1107
Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.740
Psyr_4730
FecR protein.
 
  
 0.695
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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