STRINGSTRING
Psyr_1113 Psyr_1113 Psyr_1114 Psyr_1114 Psyr_1115 Psyr_1115 Psyr_1116 Psyr_1116 Psyr_1112 Psyr_1112 Psyr_0761 Psyr_0761 Psyr_4503 Psyr_4503 ugpE ugpE Psyr_0760 Psyr_0760 Psyr_2439 Psyr_2439 Psyr_2438 Psyr_2438
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1113Glucose-binding protein. (431 aa)    
Predicted Functional Partners:
Psyr_1114
Glucose ABC transporter membrane protein.
 
 0.994
Psyr_1115
Glucose ABC transporter membrane protein.
 
 0.990
Psyr_1116
Glucose ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.968
Psyr_1112
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal.
 
     0.740
Psyr_0761
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.687
Psyr_4503
Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-.
 
 
 0.659
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.654
Psyr_0760
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
 
 
 0.644
Psyr_2439
Mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein.
 
 
 0.626
Psyr_2438
Sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein.
 
 
 0.612
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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