Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyr_0761 | Psyr_1113 | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | Glucose-binding protein. | 0.687 |
Psyr_0761 | Psyr_1115 | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | Glucose ABC transporter membrane protein. | 0.882 |
Psyr_0761 | Psyr_1116 | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | Glucose ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.896 |
Psyr_0761 | Psyr_2437 | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | Mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein. | 0.978 |
Psyr_0761 | Psyr_2438 | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | Sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein. | 0.880 |
Psyr_0761 | Psyr_2440 | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | Mannitol-binding protein / sorbitol-binding protein. | 0.630 |
Psyr_0761 | Psyr_4812 | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | Sorbitol-binding protein / mannitol-binding protein. | 0.632 |
Psyr_1113 | Psyr_0761 | Glucose-binding protein. | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | 0.687 |
Psyr_1113 | Psyr_1114 | Glucose-binding protein. | Glucose ABC transporter membrane protein. | 0.994 |
Psyr_1113 | Psyr_1115 | Glucose-binding protein. | Glucose ABC transporter membrane protein. | 0.990 |
Psyr_1113 | Psyr_1116 | Glucose-binding protein. | Glucose ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.968 |
Psyr_1113 | Psyr_2437 | Glucose-binding protein. | Mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein. | 0.575 |
Psyr_1113 | Psyr_2438 | Glucose-binding protein. | Sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein. | 0.612 |
Psyr_1113 | Psyr_2439 | Glucose-binding protein. | Mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein. | 0.626 |
Psyr_1113 | Psyr_4503 | Glucose-binding protein. | Carbohydrate ABC transporter membrane protein 1, CUT1 family; TC 3.A.1.1.-. | 0.659 |
Psyr_1114 | Psyr_1113 | Glucose ABC transporter membrane protein. | Glucose-binding protein. | 0.994 |
Psyr_1114 | Psyr_1115 | Glucose ABC transporter membrane protein. | Glucose ABC transporter membrane protein. | 0.995 |
Psyr_1114 | Psyr_1116 | Glucose ABC transporter membrane protein. | Glucose ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.994 |
Psyr_1114 | Psyr_2437 | Glucose ABC transporter membrane protein. | Mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein. | 0.863 |
Psyr_1114 | Psyr_2438 | Glucose ABC transporter membrane protein. | Sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein. | 0.813 |
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