Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_0268 | Psyr_1250 | Psyr_0268 | Psyr_1250 | DSBA oxidoreductase. | Conserved hypothetical protein. | 0.635 |
Psyr_0268 | Psyr_1289 | Psyr_0268 | Psyr_1289 | DSBA oxidoreductase. | Glutaredoxin; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.674 |
Psyr_0268 | dsbB1 | Psyr_0268 | Psyr_1140 | DSBA oxidoreductase. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.403 |
Psyr_1046 | dsbB1 | Psyr_1046 | Psyr_1140 | Fusaric acid resistance protein conserved region. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.411 |
Psyr_1250 | Psyr_0268 | Psyr_1250 | Psyr_0268 | Conserved hypothetical protein. | DSBA oxidoreductase. | 0.635 |
Psyr_1250 | dsbB1 | Psyr_1250 | Psyr_1140 | Conserved hypothetical protein. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.404 |
Psyr_1289 | Psyr_0268 | Psyr_1289 | Psyr_0268 | Glutaredoxin; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | DSBA oxidoreductase. | 0.674 |
Psyr_1289 | dsbB1 | Psyr_1289 | Psyr_1140 | Glutaredoxin; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.599 |
Psyr_1440 | dsbB1 | Psyr_1440 | Psyr_1140 | DSBA oxidoreductase. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.543 |
Psyr_2117 | dsbB1 | Psyr_2117 | Psyr_1140 | Conserved hypothetical protein. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.435 |
Psyr_4329 | dsbB1 | Psyr_4329 | Psyr_1140 | Conserved hypothetical protein. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.468 |
dsbB1 | Psyr_0268 | Psyr_1140 | Psyr_0268 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | DSBA oxidoreductase. | 0.403 |
dsbB1 | Psyr_1046 | Psyr_1140 | Psyr_1046 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Fusaric acid resistance protein conserved region. | 0.411 |
dsbB1 | Psyr_1250 | Psyr_1140 | Psyr_1250 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Conserved hypothetical protein. | 0.404 |
dsbB1 | Psyr_1289 | Psyr_1140 | Psyr_1289 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Glutaredoxin; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.599 |
dsbB1 | Psyr_1440 | Psyr_1140 | Psyr_1440 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | DSBA oxidoreductase. | 0.543 |
dsbB1 | Psyr_2117 | Psyr_1140 | Psyr_2117 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Conserved hypothetical protein. | 0.435 |
dsbB1 | Psyr_4329 | Psyr_1140 | Psyr_4329 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Conserved hypothetical protein. | 0.468 |