STRINGSTRING
Psyr_1309 Psyr_1309 Psyr_1307 Psyr_1307 Psyr_1306 Psyr_1306 Psyr_1303 Psyr_1303 Psyr_1304 Psyr_1304 Psyr_1292 Psyr_1292 Psyr_2940 Psyr_2940 Psyr_2113 Psyr_2113 cheB2 cheB2 Psyr_3942 Psyr_3942 Psyr_0994 Psyr_0994
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1309Response regulator receiver modulated diguanylate cyclase. (334 aa)    
Predicted Functional Partners:
Psyr_1307
Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt.
 
 0.994
Psyr_1306
CheW-like protein.
 
  
 0.993
Psyr_1303
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer.
 
  
 0.986
Psyr_1304
CheW-like protein.
 
 
 0.984
Psyr_1292
Multi-sensor hybrid histidine kinase.
 
 0.976
Psyr_2940
PAS.
 
 0.968
Psyr_2113
Multi-sensor hybrid histidine kinase.
 
 0.950
cheB2
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
  
 0.888
Psyr_3942
Diguanylate cyclase/phosphodiesterase.
 
 0.872
Psyr_0994
Metal-dependent phosphohydrolase, HD subdomain protein.
   
 0.867
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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