Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Psyr_1403 | Psyr_3466 | Psyr_1403 | Psyr_3466 | Cold-shock DNA-binding protein family. | Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.776 |
| Psyr_1403 | dnaK | Psyr_1403 | Psyr_4195 | Cold-shock DNA-binding protein family. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.481 |
| Psyr_1403 | rnr | Psyr_1403 | Psyr_0579 | Cold-shock DNA-binding protein family. | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.532 |
| Psyr_1403 | rplO | Psyr_1403 | Psyr_4529 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.430 |
| Psyr_1403 | rpmE | Psyr_1403 | Psyr_0399 | Cold-shock DNA-binding protein family. | LSU ribosomal protein L31P; Binds the 23S rRNA. | 0.422 |
| Psyr_1403 | rpsE | Psyr_1403 | Psyr_4531 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.442 |
| Psyr_1403 | rpsL | Psyr_1403 | Psyr_4553 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.481 |
| Psyr_1403 | rpsQ | Psyr_1403 | Psyr_4539 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.467 |
| Psyr_1403 | rpsT | Psyr_1403 | Psyr_0707 | Cold-shock DNA-binding protein family. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.418 |
| Psyr_1403 | tuf | Psyr_1403 | Psyr_4550 | Cold-shock DNA-binding protein family. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.769 |
| Psyr_3466 | Psyr_1403 | Psyr_3466 | Psyr_1403 | Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Cold-shock DNA-binding protein family. | 0.776 |
| Psyr_3466 | dnaK | Psyr_3466 | Psyr_4195 | Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.605 |
| Psyr_3466 | tuf | Psyr_3466 | Psyr_4550 | Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.829 |
| dnaK | Psyr_1403 | Psyr_4195 | Psyr_1403 | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Cold-shock DNA-binding protein family. | 0.481 |
| dnaK | Psyr_3466 | Psyr_4195 | Psyr_3466 | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.605 |
| dnaK | rnr | Psyr_4195 | Psyr_0579 | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.669 |
| dnaK | rpsE | Psyr_4195 | Psyr_4531 | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.579 |
| rnr | Psyr_1403 | Psyr_0579 | Psyr_1403 | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Cold-shock DNA-binding protein family. | 0.532 |
| rnr | dnaK | Psyr_0579 | Psyr_4195 | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | Heat shock protein Hsp70; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.669 |
| rnr | rpsL | Psyr_0579 | Psyr_4553 | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.429 |
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