Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Psyr_0134 | Psyr_1544 | Psyr_0134 | Psyr_1544 | Aminotransferase, class V. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.557 |
| Psyr_0134 | Psyr_3220 | Psyr_0134 | Psyr_3220 | Aminotransferase, class V. | Aminotransferase, class V. | 0.902 |
| Psyr_0134 | iscS | Psyr_0134 | Psyr_1237 | Aminotransferase, class V. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.904 |
| Psyr_0134 | thiI | Psyr_0134 | Psyr_4816 | Aminotransferase, class V. | [ThiS-adenylate] sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.976 |
| Psyr_1543 | Psyr_1544 | Psyr_1543 | Psyr_1544 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.574 |
| Psyr_1543 | Psyr_1545 | Psyr_1543 | Psyr_1545 | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Protein of unknown function UPF0118. | 0.510 |
| Psyr_1544 | Psyr_0134 | Psyr_1544 | Psyr_0134 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Aminotransferase, class V. | 0.557 |
| Psyr_1544 | Psyr_1543 | Psyr_1544 | Psyr_1543 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.574 |
| Psyr_1544 | Psyr_1545 | Psyr_1544 | Psyr_1545 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Protein of unknown function UPF0118. | 0.740 |
| Psyr_1544 | Psyr_3168 | Psyr_1544 | Psyr_3168 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | DsrE-like protein. | 0.768 |
| Psyr_1544 | Psyr_3220 | Psyr_1544 | Psyr_3220 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Aminotransferase, class V. | 0.557 |
| Psyr_1544 | Psyr_3602 | Psyr_1544 | Psyr_3602 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Rhodanese-like protein. | 0.475 |
| Psyr_1544 | Psyr_5055 | Psyr_1544 | Psyr_5055 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | YeeE/YedE. | 0.529 |
| Psyr_1544 | cysN | Psyr_1544 | Psyr_4126 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.595 |
| Psyr_1544 | iscS | Psyr_1544 | Psyr_1237 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.557 |
| Psyr_1544 | thiI | Psyr_1544 | Psyr_4816 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | [ThiS-adenylate] sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.476 |
| Psyr_1545 | Psyr_1543 | Psyr_1545 | Psyr_1543 | Protein of unknown function UPF0118. | Peptidase M48, Ste24p; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.510 |
| Psyr_1545 | Psyr_1544 | Psyr_1545 | Psyr_1544 | Protein of unknown function UPF0118. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.740 |
| Psyr_3168 | Psyr_1544 | Psyr_3168 | Psyr_1544 | DsrE-like protein. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.768 |
| Psyr_3168 | thiI | Psyr_3168 | Psyr_4816 | DsrE-like protein. | [ThiS-adenylate] sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.435 |
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