STRINGSTRING
Psyr_1574 Psyr_1574 Psyr_1573 Psyr_1573 Psyr_1575 Psyr_1575 Psyr_1576 Psyr_1576 Psyr_1572 Psyr_1572 Psyr_1826 Psyr_1826 clpP clpP rlmL rlmL Psyr_1577 Psyr_1577
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1574Oligopeptidase B, Serine peptidase, MEROPS family S09A. (686 aa)    
Predicted Functional Partners:
Psyr_1573
Cyclic nucleotide-binding protein.
       0.606
Psyr_1575
Conserved hypothetical protein.
       0.577
Psyr_1576
Glutamine amidotransferase, class-II.
       0.457
Psyr_1572
HNH endonuclease.
       0.447
Psyr_1826
Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
  
  
 0.437
clpP
ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
  
 0.436
rlmL
23S rRNA m(2)G-2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
      
 0.416
Psyr_1577
Conserved hypothetical protein.
       0.400
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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