STRINGSTRING
Psyr_1584 Psyr_1584 arnT arnT Psyr_1562 Psyr_1562 Psyr_2612 Psyr_2612 rlpA rlpA rlpA-2 rlpA-2 Psyr_0546 Psyr_0546 HrcT HrcT HrcJ HrcJ HrcS HrcS Psyr_1117 Psyr_1117
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1584Aspartyl/Asparaginyl beta-hydroxylase. (312 aa)    
Predicted Functional Partners:
arnT
Glycosyl transferase, family 39; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.
     
 0.907
Psyr_1562
phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase.
     
 0.906
Psyr_2612
syrP protein, putative.
  
   
 0.738
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
      
 0.672
rlpA-2
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
      
 0.672
Psyr_0546
Lipoprotein, putative.
  
     0.576
HrcT
Type III secretion protein HrcT.
  
   
 0.551
HrcJ
Type III secretion apparatus lipoprotein, YscJ/HrcJ family.
  
   
 0.531
HrcS
Type III secretion protein HrcS.
  
   
 0.528
Psyr_1117
Porin, OprB family; TC 1.B.19.
  
     0.517
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.