STRINGSTRING
Psyr_1767 Psyr_1767 Psyr_2280 Psyr_2280 ssuD ssuD Psyr_3599 Psyr_3599 RibC RibC Psyr_1766 Psyr_1766 Psyr_3679 Psyr_3679 Psyr_1768 Psyr_1768
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1767NADPH-dependent FMN reductase. (194 aa)    
Predicted Functional Partners:
Psyr_2280
Alkanesulfonate monooxygenase.
  
 0.629
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
 0.629
Psyr_3599
Alkanesulfonate monooxygenase.
  
 0.629
RibC
FMN adenylyltransferase / riboflavin kinase; Belongs to the ribF family.
    
 0.546
Psyr_1766
Conserved hypothetical protein.
       0.546
Psyr_3679
cob(II)yrinic acid a,c-diamide reductase.
     
 0.532
Psyr_1768
Conserved hypothetical protein.
       0.524
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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