STRINGSTRING
Psyr_1881 Psyr_1881 Psyr_1880 Psyr_1880 Psyr_0876 Psyr_0876 Psyr_1105 Psyr_1105 Psyr_3124 Psyr_3124 Psyr_4826 Psyr_4826 Psyr_0137 Psyr_0137 Psyr_0204 Psyr_0204 Psyr_0874 Psyr_0874 tolR tolR Psyr_1634 Psyr_1634
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1881Conserved hypothetical protein. (176 aa)    
Predicted Functional Partners:
Psyr_1880
Cytochrome c, class I.
     
 0.592
Psyr_0876
TonB-dependent receptor:TonB-dependent receptor, C-terminal.
  
 
 0.493
Psyr_1105
TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor.
  
 
 0.493
Psyr_3124
TonB-dependent siderophore receptor.
  
 
 0.493
Psyr_4826
TonB-dependent receptor:TonB box, N-terminal.
  
 
 0.493
Psyr_0137
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
  
 
 0.466
Psyr_0204
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
  
 
 0.466
Psyr_0874
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
  
 
 0.466
tolR
Cell division and transport-associated protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.466
Psyr_1634
Biopolymer transport protein ExbD/TolR.
  
 
 0.466
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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