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Psyr_1954 Psyr_1954 Psyr_1953 Psyr_1953 Psyr_1952 Psyr_1952 Psyr_1955 Psyr_1955 Psyr_1951 Psyr_1951 Psyr_1949 Psyr_1949 Psyr_1950 Psyr_1950 Psyr_1948 Psyr_1948 Psyr_2368 Psyr_2368 Psyr_2141 Psyr_2141 Psyr_1956 Psyr_1956
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_1954Conserved hypothetical protein. (181 aa)    
Predicted Functional Partners:
Psyr_1953
Conserved hypothetical protein.
  
    0.928
Psyr_1952
Hypothetical protein.
  
    0.915
Psyr_1955
Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix.
  
    0.915
Psyr_1951
Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
    0.875
Psyr_1949
ABC-3.
  
    0.873
Psyr_1950
ABC transporter.
  
  
 0.850
Psyr_1948
ABC transporter, periplasmic substrate-binding protein, putative.
  
    0.810
Psyr_2368
Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
    0.518
Psyr_2141
Hypothetical protein.
   
  
 0.442
Psyr_1956
Pyoverdine biosynthesis regulatory gene, putative.
       0.422
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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