STRINGSTRING
CysB CysB ssuB1 ssuB1 cysD cysD Psyr_3312 Psyr_3312 Psyr_2076 Psyr_2076 Psyr_0361 Psyr_0361 Psyr_3956 Psyr_3956 Psyr_2929 Psyr_2929 Psyr_1366 Psyr_1366 Psyr_4811 Psyr_4811 Psyr_1736 Psyr_1736
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CysBRegulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family. (324 aa)    
Predicted Functional Partners:
ssuB1
ABC transporter; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
      
 0.681
cysD
Sulfate adenylyltransferase subunit 2.
      
 0.675
Psyr_3312
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.539
Psyr_2076
UspA.
       0.526
Psyr_0361
Conserved hypothetical protein.
      
 0.520
Psyr_3956
Sigma E regulatory protein, MucB/RseB.
  
     0.519
Psyr_2929
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.476
Psyr_1366
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.467
Psyr_4811
Transcriptional regulator, AraC family.
   
  
 0.462
Psyr_1736
Helix-turn-helix, Fis-type.
      
 0.459
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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