Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Psyr_2122 | Psyr_2123 | Protocatechuate 3,4-dioxygenase, beta subunit. | Protocatechuate 3,4-dioxygenase, alpha subunit. | 0.998 |
| Psyr_2122 | Psyr_2124 | Protocatechuate 3,4-dioxygenase, beta subunit. | Benzoate transport. | 0.638 |
| Psyr_2122 | Psyr_2125 | Protocatechuate 3,4-dioxygenase, beta subunit. | 3-carboxy-cis,cis-muconate cycloisomerase. | 0.988 |
| Psyr_2122 | Psyr_2126 | Protocatechuate 3,4-dioxygenase, beta subunit. | 4-carboxymuconolactone decarboxylase. | 0.917 |
| Psyr_2122 | Psyr_2130 | Protocatechuate 3,4-dioxygenase, beta subunit. | 4-hydroxyphenylpyruvate dioxygenase. | 0.807 |
| Psyr_2122 | Psyr_3005 | Protocatechuate 3,4-dioxygenase, beta subunit. | 3-oxoadipate enol-lactonase. | 0.664 |
| Psyr_2122 | Psyr_3500 | Protocatechuate 3,4-dioxygenase, beta subunit. | 4-hydroxybenzoate 3-monooxygenase. | 0.982 |
| Psyr_2122 | Psyr_4012 | Protocatechuate 3,4-dioxygenase, beta subunit. | Glutaconate CoA-transferase. | 0.491 |
| Psyr_2122 | Psyr_4013 | Protocatechuate 3,4-dioxygenase, beta subunit. | Glutaconate CoA-transferase. | 0.519 |
| Psyr_2122 | Psyr_4169 | Protocatechuate 3,4-dioxygenase, beta subunit. | 4-carboxymuconolactone decarboxylase. | 0.740 |
| Psyr_2123 | Psyr_2122 | Protocatechuate 3,4-dioxygenase, alpha subunit. | Protocatechuate 3,4-dioxygenase, beta subunit. | 0.998 |
| Psyr_2123 | Psyr_2124 | Protocatechuate 3,4-dioxygenase, alpha subunit. | Benzoate transport. | 0.690 |
| Psyr_2123 | Psyr_2125 | Protocatechuate 3,4-dioxygenase, alpha subunit. | 3-carboxy-cis,cis-muconate cycloisomerase. | 0.988 |
| Psyr_2123 | Psyr_2126 | Protocatechuate 3,4-dioxygenase, alpha subunit. | 4-carboxymuconolactone decarboxylase. | 0.915 |
| Psyr_2123 | Psyr_2130 | Protocatechuate 3,4-dioxygenase, alpha subunit. | 4-hydroxyphenylpyruvate dioxygenase. | 0.820 |
| Psyr_2123 | Psyr_3005 | Protocatechuate 3,4-dioxygenase, alpha subunit. | 3-oxoadipate enol-lactonase. | 0.668 |
| Psyr_2123 | Psyr_3500 | Protocatechuate 3,4-dioxygenase, alpha subunit. | 4-hydroxybenzoate 3-monooxygenase. | 0.981 |
| Psyr_2123 | Psyr_4012 | Protocatechuate 3,4-dioxygenase, alpha subunit. | Glutaconate CoA-transferase. | 0.470 |
| Psyr_2123 | Psyr_4013 | Protocatechuate 3,4-dioxygenase, alpha subunit. | Glutaconate CoA-transferase. | 0.502 |
| Psyr_2123 | Psyr_4169 | Protocatechuate 3,4-dioxygenase, alpha subunit. | 4-carboxymuconolactone decarboxylase. | 0.699 |
page 1 of 5