STRINGSTRING
Psyr_2219 Psyr_2219 Psyr_4318 Psyr_4318 Psyr_0030 Psyr_0030 Psyr_2532 Psyr_2532 Psyr_0072 Psyr_0072 Psyr_2218 Psyr_2218 Psyr_3357 Psyr_3357 Psyr_0688 Psyr_0688 Psyr_1800 Psyr_1800 Psyr_3521 Psyr_3521 Psyr_0767 Psyr_0767
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2219Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (317 aa)    
Predicted Functional Partners:
Psyr_4318
Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
     0.698
Psyr_0030
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.677
Psyr_2532
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.671
Psyr_0072
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.658
Psyr_2218
Beta-lactamase-like protein.
 
  
 0.647
Psyr_3357
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.646
Psyr_0688
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.616
Psyr_1800
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.610
Psyr_3521
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.593
Psyr_0767
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.586
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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