STRINGSTRING
Psyr_2256 Psyr_2256 PhnH PhnH Psyr_2253 Psyr_2253 Psyr_2251 Psyr_2251 Psyr_2257 Psyr_2257 Psyr_2254 Psyr_2254 PhnK PhnK phnN phnN Psyr_2248 Psyr_2248 Psyr_2250 Psyr_2250 PhnP PhnP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2256ABC transporter. (238 aa)    
Predicted Functional Partners:
PhnH
Phosphonate metabolism.
 
 0.999
Psyr_2253
Phosphonate metabolism.
 
 0.999
Psyr_2251
Phosphonate metabolism PhnG.
 
 0.998
Psyr_2257
Amidohydrolase.
 
 
 0.998
Psyr_2254
Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 
 0.992
PhnK
ABC transporter.
 
 
0.980
phnN
Guanylate kinase/L-type calcium channel region; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.975
Psyr_2248
Phosphonate-binding periplasmic protein.
 
  
 0.942
Psyr_2250
Transcriptional regulator, GntR family.
 
  
 0.937
PhnP
Beta-lactamase-like protein.
 
  
 0.924
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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