Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FolX | Psyr_0872 | Psyr_1019 | Psyr_0872 | Dihydroneopterin aldolase. | Alkaline phosphatase. | 0.907 |
FolX | Psyr_3215 | Psyr_1019 | Psyr_3215 | Dihydroneopterin aldolase. | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | 0.918 |
FolX | folE | Psyr_1019 | Psyr_1020 | Dihydroneopterin aldolase. | GTP cyclohydrolase I. | 0.992 |
FolX | folE-2 | Psyr_1019 | Psyr_1845 | Dihydroneopterin aldolase. | GTP cyclohydrolase I. | 0.967 |
FolX | folE2 | Psyr_1019 | Psyr_2269 | Dihydroneopterin aldolase. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.907 |
FolX | ribB | Psyr_1019 | Psyr_2402 | Dihydroneopterin aldolase. | 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.426 |
FolX | ribB-2 | Psyr_1019 | Psyr_4460 | Dihydroneopterin aldolase. | 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.426 |
Psyr_0872 | FolX | Psyr_0872 | Psyr_1019 | Alkaline phosphatase. | Dihydroneopterin aldolase. | 0.907 |
Psyr_0872 | Psyr_3215 | Psyr_0872 | Psyr_3215 | Alkaline phosphatase. | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | 0.900 |
Psyr_0872 | folE | Psyr_0872 | Psyr_1020 | Alkaline phosphatase. | GTP cyclohydrolase I. | 0.909 |
Psyr_0872 | folE-2 | Psyr_0872 | Psyr_1845 | Alkaline phosphatase. | GTP cyclohydrolase I. | 0.909 |
Psyr_0872 | folE2 | Psyr_0872 | Psyr_2269 | Alkaline phosphatase. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.900 |
Psyr_2270 | folE2 | Psyr_2270 | Psyr_2269 | Transferase hexapeptide repeat protein. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.917 |
Psyr_3215 | FolX | Psyr_3215 | Psyr_1019 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | Dihydroneopterin aldolase. | 0.918 |
Psyr_3215 | Psyr_0872 | Psyr_3215 | Psyr_0872 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | Alkaline phosphatase. | 0.900 |
Psyr_3215 | folE | Psyr_3215 | Psyr_1020 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | GTP cyclohydrolase I. | 0.955 |
Psyr_3215 | folE-2 | Psyr_3215 | Psyr_1845 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | GTP cyclohydrolase I. | 0.955 |
Psyr_3215 | folE2 | Psyr_3215 | Psyr_2269 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.927 |
folE | FolX | Psyr_1020 | Psyr_1019 | GTP cyclohydrolase I. | Dihydroneopterin aldolase. | 0.992 |
folE | Psyr_0872 | Psyr_1020 | Psyr_0872 | GTP cyclohydrolase I. | Alkaline phosphatase. | 0.909 |
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