STRINGSTRING
Psyr_2287 Psyr_2287 Psyr_2288 Psyr_2288 Psyr_4826 Psyr_4826 Psyr_2289 Psyr_2289 Psyr_4481 Psyr_4481 Psyr_0136 Psyr_0136 Psyr_3124 Psyr_3124 Psyr_4497 Psyr_4497 Psyr_0137 Psyr_0137 Psyr_4498 Psyr_4498 Psyr_1105 Psyr_1105
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2287Outer membrane transport energization protein TonB; TC 2.C.1.1.1. (277 aa)    
Predicted Functional Partners:
Psyr_2288
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.894
Psyr_4826
TonB-dependent receptor:TonB box, N-terminal.
 
 
 0.888
Psyr_2289
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
 
 
 0.841
Psyr_4481
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.756
Psyr_0136
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.741
Psyr_3124
TonB-dependent siderophore receptor.
 
 
 0.733
Psyr_4497
Outer membrane transport energization protein ExbB; TC 2.C.1.1.1.
 
 
 0.733
Psyr_0137
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
 
 
 0.673
Psyr_4498
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
 
 
 0.666
Psyr_1105
TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor.
 
 
 0.648
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.