STRINGSTRING
Psyr_2304 Psyr_2304 Psyr_2187 Psyr_2187 Psyr_3936 Psyr_3936 Psyr_3166 Psyr_3166 Psyr_3167 Psyr_3167 Psyr_2306 Psyr_2306 Psyr_4226 Psyr_4226 Psyr_1899 Psyr_1899 mntH mntH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2304General substrate transporter:Major facilitator superfamily. (472 aa)    
Predicted Functional Partners:
Psyr_2187
General substrate transporter:Major facilitator superfamily.
  
     0.572
Psyr_3936
General substrate transporter:Major facilitator superfamily.
  
   
 0.544
Psyr_3166
ABC transporter, periplasmic substrate-binding protein, putative.
  
     0.518
Psyr_3167
Citrate-proton symport.
  
     0.472
Psyr_2306
General substrate transporter:Major facilitator superfamily.
 
    
0.470
Psyr_4226
D-galactonate transporter.
  
     0.462
Psyr_1899
General substrate transporter:Major facilitator superfamily.
  
     0.456
mntH
Natural resistance-associated macrophage protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
       0.406
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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