STRINGSTRING
Psyr_2399 Psyr_2399 Psyr_2400 Psyr_2400 Psyr_2398 Psyr_2398 Psyr_2401 Psyr_2401 Psyr_4864 Psyr_4864 Psyr_4613 Psyr_4613 Psyr_4865 Psyr_4865 Psyr_2513 Psyr_2513 potA potA potA-2 potA-2 Psyr_2335 Psyr_2335
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2399Binding-protein-dependent transport systems inner membrane component. (271 aa)    
Predicted Functional Partners:
Psyr_2400
Binding-protein-dependent transport systems inner membrane component.
  
0.964
Psyr_2398
ABC transporter; Belongs to the ABC transporter superfamily.
  
 0.963
Psyr_2401
Extracellular solute-binding protein, family 1.
 
  
 0.954
Psyr_4864
Extracellular solute-binding protein, family 1.
  
 0.945
Psyr_4613
Binding-protein-dependent transport systems inner membrane component.
  
 0.920
Psyr_4865
Extracellular solute-binding protein, family 1.
  
 0.919
Psyr_2513
Extracellular solute-binding protein, family 1.
  
 0.908
potA
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 0.839
potA-2
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 0.826
Psyr_2335
ABC transporter; Belongs to the ABC transporter superfamily.
  
 0.814
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.