STRINGSTRING
Psyr_2427 Psyr_2427 Psyr_2222 Psyr_2222 Psyr_4867 Psyr_4867 Psyr_4715 Psyr_4715 Psyr_4868 Psyr_4868 Psyr_2706 Psyr_2706 Psyr_3492 Psyr_3492 Psyr_4866 Psyr_4866 Psyr_0678 Psyr_0678 Psyr_2223 Psyr_2223 Psyr_2705 Psyr_2705
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2427Gamma-glutamylputrescine oxidase. (427 aa)    
Predicted Functional Partners:
Psyr_2222
Aminomethyltransferase; Belongs to the GcvT family.
 
 
 0.792
Psyr_4867
L-glutamine synthetase.
 
  
 0.790
Psyr_4715
Sarcosine oxidase, alpha subunit, heterotetrameric; Belongs to the GcvT family.
 
 
 0.787
Psyr_4868
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
 
  
 0.773
Psyr_2706
Gamma-glutamyl-gamma-aminobutyrate hydrolase.
 
  
 0.760
Psyr_3492
L-glutamine synthetase.
 
  
 0.757
Psyr_4866
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.669
Psyr_0678
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.593
Psyr_2223
Sarcosine oxidase, delta subunit.
 
 
 0.421
Psyr_2705
Helix-turn-helix motif protein.
 
  
 0.411
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.