STRINGSTRING
Psyr_2470 Psyr_2470 Psyr_2469 Psyr_2469 fadB fadB Psyr_2467 Psyr_2467 Psyr_3030 Psyr_3030 Psyr_2452 Psyr_2452 Psyr_1875 Psyr_1875 Psyr_2468 Psyr_2468 Psyr_2176 Psyr_2176 Psyr_2474 Psyr_2474 Psyr_1996 Psyr_1996
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2470isovaleryl-CoA dehydrogenase. (387 aa)    
Predicted Functional Partners:
Psyr_2469
Propionyl-CoA carboxylase.
 
 
 0.994
fadB
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 0.982
Psyr_2467
3-methylcrotonoyl-CoA carboxylase, alpha subunit.
 
 0.980
Psyr_3030
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.969
Psyr_2452
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.965
Psyr_1875
Enoyl-CoA hydratase/isomerase.
 
 0.948
Psyr_2468
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.945
Psyr_2176
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal.
  
  
 
0.918
Psyr_2474
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region.
  
  
 
0.914
Psyr_1996
Electron transfer flavoprotein, alpha subunit.
 
 0.757
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (20%) [HD]