STRINGSTRING
Psyr_2702 Psyr_2702 Psyr_2703 Psyr_2703 Psyr_2704 Psyr_2704 Psyr_4475 Psyr_4475 Psyr_2701 Psyr_2701 Psyr_4936 Psyr_4936 Psyr_3222 Psyr_3222 Psyr_3469 Psyr_3469 Psyr_0926 Psyr_0926 Psyr_4935 Psyr_4935 Psyr_0924 Psyr_0924
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2702UDP-galactopyranose mutase. (393 aa)    
Predicted Functional Partners:
Psyr_2703
Conserved hypothetical protein.
  
 0.996
Psyr_2704
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.936
Psyr_4475
NAD-dependent epimerase/dehydratase.
  
 
 0.923
Psyr_2701
Conserved hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
 
     0.918
Psyr_4936
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.917
Psyr_3222
Polysaccharide biosynthesis protein.
  
  
 0.916
Psyr_3469
Glycosyl transferase, family 2.
 
  
 0.762
Psyr_0926
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.726
Psyr_4935
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.726
Psyr_0924
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.716
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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