STRINGSTRING
Psyr_2736 Psyr_2736 Psyr_1835 Psyr_1835 Psyr_2379 Psyr_2379 Psyr_2683 Psyr_2683 Psyr_4872 Psyr_4872 Psyr_2490 Psyr_2490 Psyr_0932 Psyr_0932 Psyr_0687 Psyr_0687 Psyr_0931 Psyr_0931 Psyr_2605 Psyr_2605 Psyr_3394 Psyr_3394
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2736Glycosidase, putative. (687 aa)    
Predicted Functional Partners:
Psyr_1835
Ethanolamine:proton symporter, EAT family; TC 2.A.3.5.1.
   
 0.624
Psyr_2379
Amino acid/polyamine/organocation transporter, APC superfamily; TC 2.A.3.
   
 0.624
Psyr_2683
Arginine:ornithine antiporter, APA family; TC 2.A.3.2.3.
   
 0.624
Psyr_4872
Conserved hypothetical protein.
  
   
 0.607
Psyr_2490
Trehalose synthase.
  
 
 0.604
Psyr_0932
Conserved hypothetical protein.
 
   
 0.580
Psyr_0687
Conserved hypothetical protein.
  
     0.578
Psyr_0931
Hemolysin-type calcium-binding region.
 
   
 0.555
Psyr_2605
Transposase, putative.
  
  
 0.544
Psyr_3394
Conserved hypothetical protein.
  
     0.532
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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