STRINGSTRING
Psyr_2742 Psyr_2742 Psyr_2741 Psyr_2741 Psyr_2745 Psyr_2745 Psyr_2743 Psyr_2743 Psyr_2744 Psyr_2744 Psyr_2746 Psyr_2746 Psyr_1992 Psyr_1992 Psyr_2431 Psyr_2431 glgA glgA Psyr_1367 Psyr_1367 Psyr_2956 Psyr_2956
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2742Iron-containing alcohol dehydrogenase. (384 aa)    
Predicted Functional Partners:
Psyr_2741
Beta-lactamase.
       0.776
Psyr_2745
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit:Ornithine cyclodeaminase/mu-crystallin.
  
 
 0.715
Psyr_2743
Lysine exporter protein (LYSE/YGGA).
  
    0.703
Psyr_2744
Conserved hypothetical protein.
       0.678
Psyr_2746
L-lysine 6-monooxygenase, putative.
       0.673
Psyr_1992
Zinc-containing alcohol dehydrogenase superfamily.
  
 
 0.616
Psyr_2431
Zinc-containing alcohol dehydrogenase superfamily.
  
 
 0.616
glgA
Starch (bacterial glycogen) synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.601
Psyr_1367
Zinc-containing alcohol dehydrogenase superfamily.
   
 
 0.561
Psyr_2956
Zinc-containing alcohol dehydrogenase superfamily; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.561
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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