STRINGSTRING
Psyr_2769 Psyr_2769 Psyr_2770 Psyr_2770 Psyr_2768 Psyr_2768 Psyr_2771 Psyr_2771 Psyr_2767 Psyr_2767 Psyr_2774 Psyr_2774 Psyr_2772 Psyr_2772 Psyr_2766 Psyr_2766
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2769Conserved hypothetical protein. (104 aa)    
Predicted Functional Partners:
Psyr_2770
Tail fiber domain protein.
  
  
 0.797
Psyr_2768
Tail fiber assembly domain protein.
       0.756
Psyr_2771
Conserved domain protein.
       0.697
Psyr_2767
Glycoside hydrolase, family 19.
  
    0.439
Psyr_2774
Bacteriophage lambda tail assembly I.
  
    0.434
Psyr_2772
Fibronectin, type III.
  
    0.423
Psyr_2766
Conserved hypothetical protein.
       0.408
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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