STRINGSTRING
Psyr_2779 Psyr_2779 Psyr_2777 Psyr_2777 Psyr_2778 Psyr_2778 Psyr_2780 Psyr_2780 Psyr_2772 Psyr_2772 Psyr_2774 Psyr_2774 Psyr_2781 Psyr_2781 Psyr_2783 Psyr_2783 Psyr_2782 Psyr_2782 Psyr_4583 Psyr_4583 Psyr_2784 Psyr_2784
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2779Phage minor tail. (112 aa)    
Predicted Functional Partners:
Psyr_2777
NLP/P60.
 
  
 0.990
Psyr_2778
Phage minor tail protein L.
 
    0.984
Psyr_2780
Phage tail tape measure protein lambda.
 
  
 0.982
Psyr_2772
Fibronectin, type III.
 
    0.933
Psyr_2774
Bacteriophage lambda tail assembly I.
 
    0.930
Psyr_2781
Hypothetical protein.
       0.790
Psyr_2783
Conserved hypothetical protein.
       0.626
Psyr_2782
Hypothetical protein.
       0.625
Psyr_4583
Glycoside hydrolase, family 19.
  
    0.613
Psyr_2784
Phage-related conserved hypothetical protein.
       0.493
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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