Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyr_2767 | Psyr_2772 | Glycoside hydrolase, family 19. | Fibronectin, type III. | 0.620 |
Psyr_2767 | Psyr_2774 | Glycoside hydrolase, family 19. | Bacteriophage lambda tail assembly I. | 0.569 |
Psyr_2767 | Psyr_2777 | Glycoside hydrolase, family 19. | NLP/P60. | 0.522 |
Psyr_2767 | Psyr_2778 | Glycoside hydrolase, family 19. | Phage minor tail protein L. | 0.478 |
Psyr_2767 | Psyr_2779 | Glycoside hydrolase, family 19. | Phage minor tail. | 0.477 |
Psyr_2767 | Psyr_2780 | Glycoside hydrolase, family 19. | Phage tail tape measure protein lambda. | 0.512 |
Psyr_2772 | Psyr_2767 | Fibronectin, type III. | Glycoside hydrolase, family 19. | 0.620 |
Psyr_2772 | Psyr_2774 | Fibronectin, type III. | Bacteriophage lambda tail assembly I. | 0.967 |
Psyr_2772 | Psyr_2777 | Fibronectin, type III. | NLP/P60. | 0.944 |
Psyr_2772 | Psyr_2778 | Fibronectin, type III. | Phage minor tail protein L. | 0.936 |
Psyr_2772 | Psyr_2779 | Fibronectin, type III. | Phage minor tail. | 0.933 |
Psyr_2772 | Psyr_2780 | Fibronectin, type III. | Phage tail tape measure protein lambda. | 0.920 |
Psyr_2772 | Psyr_2806 | Fibronectin, type III. | Bacteriophage Lambda NinG. | 0.599 |
Psyr_2774 | Psyr_2767 | Bacteriophage lambda tail assembly I. | Glycoside hydrolase, family 19. | 0.569 |
Psyr_2774 | Psyr_2772 | Bacteriophage lambda tail assembly I. | Fibronectin, type III. | 0.967 |
Psyr_2774 | Psyr_2777 | Bacteriophage lambda tail assembly I. | NLP/P60. | 0.935 |
Psyr_2774 | Psyr_2778 | Bacteriophage lambda tail assembly I. | Phage minor tail protein L. | 0.943 |
Psyr_2774 | Psyr_2779 | Bacteriophage lambda tail assembly I. | Phage minor tail. | 0.930 |
Psyr_2774 | Psyr_2780 | Bacteriophage lambda tail assembly I. | Phage tail tape measure protein lambda. | 0.912 |
Psyr_2774 | Psyr_2806 | Bacteriophage lambda tail assembly I. | Bacteriophage Lambda NinG. | 0.408 |
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