Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Psyr_0219 | Psyr_0374 | Psyr_0219 | Psyr_0374 | Phosphomannomutase. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.928 |
| Psyr_0219 | Psyr_2908 | Psyr_0219 | Psyr_2908 | Phosphomannomutase. | Phosphoglucomutase, alpha-D-glucose phosphate-specific. | 0.943 |
| Psyr_0219 | Psyr_2980 | Psyr_0219 | Psyr_2980 | Phosphomannomutase. | UDP-glucose pyrophosphorylase. | 0.978 |
| Psyr_0219 | Psyr_2994 | Psyr_0219 | Psyr_2994 | Phosphomannomutase. | Glycoside hydrolase, family 77. | 0.913 |
| Psyr_0219 | Psyr_4792 | Psyr_0219 | Psyr_4792 | Phosphomannomutase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.926 |
| Psyr_0219 | glgB | Psyr_0219 | Psyr_2491 | Phosphomannomutase. | Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.445 |
| Psyr_0219 | glk | Psyr_0219 | Psyr_1110 | Phosphomannomutase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.930 |
| Psyr_0219 | pgi | Psyr_0219 | Psyr_0826 | Phosphomannomutase. | Glucose-6-phosphate isomerase. | 0.927 |
| Psyr_0219 | rpiA | Psyr_0219 | Psyr_4847 | Phosphomannomutase. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.915 |
| Psyr_0219 | tal | Psyr_0219 | Psyr_1914 | Phosphomannomutase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.829 |
| Psyr_0374 | Psyr_0219 | Psyr_0374 | Psyr_0219 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Phosphomannomutase. | 0.928 |
| Psyr_0374 | Psyr_2908 | Psyr_0374 | Psyr_2908 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Phosphoglucomutase, alpha-D-glucose phosphate-specific. | 0.990 |
| Psyr_0374 | Psyr_2980 | Psyr_0374 | Psyr_2980 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | UDP-glucose pyrophosphorylase. | 0.948 |
| Psyr_0374 | Psyr_2994 | Psyr_0374 | Psyr_2994 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glycoside hydrolase, family 77. | 0.986 |
| Psyr_0374 | glgB | Psyr_0374 | Psyr_2491 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.998 |
| Psyr_0374 | pgi | Psyr_0374 | Psyr_0826 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glucose-6-phosphate isomerase. | 0.792 |
| Psyr_0374 | tal | Psyr_0374 | Psyr_1914 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.461 |
| Psyr_2908 | Psyr_0219 | Psyr_2908 | Psyr_0219 | Phosphoglucomutase, alpha-D-glucose phosphate-specific. | Phosphomannomutase. | 0.943 |
| Psyr_2908 | Psyr_0374 | Psyr_2908 | Psyr_0374 | Phosphoglucomutase, alpha-D-glucose phosphate-specific. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.990 |
| Psyr_2908 | Psyr_2980 | Psyr_2908 | Psyr_2980 | Phosphoglucomutase, alpha-D-glucose phosphate-specific. | UDP-glucose pyrophosphorylase. | 0.937 |
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