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Psyr_2923 Psyr_2923 Psyr_2922 Psyr_2922 Psyr_2921 Psyr_2921 Psyr_2920 Psyr_2920 Psyr_2157 Psyr_2157 rbsD rbsD Psyr_3272 Psyr_3272 Psyr_3269 Psyr_3269 Psyr_0821 Psyr_0821 hisA hisA Psyr_3273 Psyr_3273
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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Experiments
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[Homology]
Score
Psyr_2923Carbohydrate kinase, PfkB. (308 aa)    
Predicted Functional Partners:
Psyr_2922
Permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.919
Psyr_2921
ADP-ribosylglycohydrolase.
   
 0.908
Psyr_2920
Transcriptional regulator, GntR family.
 
   
 0.763
Psyr_2157
Inosine/uridine-preferring nucleoside hydrolase; Belongs to the IUNH family.
 
  
 0.674
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.597
Psyr_3272
5-deoxyglucuronate isomerase.
 
  
 0.584
Psyr_3269
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.565
Psyr_0821
Phosphoenolpyruvate-protein phosphotransferase; TC 4.A.2.1.1; Belongs to the PEP-utilizing enzyme family.
     
 0.517
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.
  
    0.462
Psyr_3273
2-keto-myo-inositol dehydratase.
 
  
 0.451
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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