STRINGSTRING
Psyr_2927 Psyr_2927 Psyr_2926 Psyr_2926 Psyr_2928 Psyr_2928 Psyr_2929 Psyr_2929 Psyr_2243 Psyr_2243 Psyr_2924 Psyr_2924 Psyr_2925 Psyr_2925
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2927Transcriptional regulator, TetR family. (208 aa)    
Predicted Functional Partners:
Psyr_2926
General substrate transporter:Major facilitator superfamily.
 
     0.720
Psyr_2928
ABC transporter, transmembrane region:ABC transporter.
     
 0.555
Psyr_2929
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
   
   0.462
Psyr_2243
Endoribonuclease L-PSP.
  
   
 0.426
Psyr_2924
Conserved hypothetical protein.
       0.407
Psyr_2925
Helix-turn-helix motif protein.
       0.407
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.