Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CbiJ | CobH | Psyr_4420 | Psyr_4416 | precorrin-6A reductase. | precorrin-8X methylmutase. | 0.979 |
CbiJ | Psyr_3019 | Psyr_4420 | Psyr_3019 | precorrin-6A reductase. | Cobalamin (vitamin B12) biosynthesis CbiG protein. | 0.805 |
CbiJ | Psyr_3020 | Psyr_4420 | Psyr_3020 | precorrin-6A reductase. | Precorrin-4 C11-methyltransferase. | 0.967 |
CbiJ | Psyr_4414 | Psyr_4420 | Psyr_4414 | precorrin-6A reductase. | Precorrin-3 methyltransferase. | 0.996 |
CbiJ | Psyr_4415 | Psyr_4420 | Psyr_4415 | precorrin-6A reductase. | Cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. | 0.973 |
CbiJ | Psyr_4418 | Psyr_4420 | Psyr_4418 | precorrin-6A reductase. | Precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.998 |
CbiJ | cbiD | Psyr_4420 | Psyr_4419 | precorrin-6A reductase. | Cobalamin (vitamin B12) biosynthesis CbiD protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.998 |
CbiJ | cobB-2 | Psyr_4420 | Psyr_3680 | precorrin-6A reductase. | Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.796 |
CobH | CbiJ | Psyr_4416 | Psyr_4420 | precorrin-8X methylmutase. | precorrin-6A reductase. | 0.979 |
CobH | Psyr_3019 | Psyr_4416 | Psyr_3019 | precorrin-8X methylmutase. | Cobalamin (vitamin B12) biosynthesis CbiG protein. | 0.849 |
CobH | Psyr_3020 | Psyr_4416 | Psyr_3020 | precorrin-8X methylmutase. | Precorrin-4 C11-methyltransferase. | 0.969 |
CobH | Psyr_4414 | Psyr_4416 | Psyr_4414 | precorrin-8X methylmutase. | Precorrin-3 methyltransferase. | 0.999 |
CobH | Psyr_4415 | Psyr_4416 | Psyr_4415 | precorrin-8X methylmutase. | Cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. | 0.990 |
CobH | Psyr_4418 | Psyr_4416 | Psyr_4418 | precorrin-8X methylmutase. | Precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.999 |
CobH | cbiD | Psyr_4416 | Psyr_4419 | precorrin-8X methylmutase. | Cobalamin (vitamin B12) biosynthesis CbiD protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.968 |
CobH | cobB-2 | Psyr_4416 | Psyr_3680 | precorrin-8X methylmutase. | Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.993 |
Psyr_3017 | Psyr_3018 | Psyr_3017 | Psyr_3018 | Conserved hypothetical protein. | Membrane protein, putative. | 0.963 |
Psyr_3017 | Psyr_3019 | Psyr_3017 | Psyr_3019 | Conserved hypothetical protein. | Cobalamin (vitamin B12) biosynthesis CbiG protein. | 0.781 |
Psyr_3017 | Psyr_3020 | Psyr_3017 | Psyr_3020 | Conserved hypothetical protein. | Precorrin-4 C11-methyltransferase. | 0.685 |
Psyr_3018 | Psyr_3017 | Psyr_3018 | Psyr_3017 | Membrane protein, putative. | Conserved hypothetical protein. | 0.963 |
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