STRINGSTRING
Psyr_3057 Psyr_3057 Psyr_0823 Psyr_0823 Psyr_3055 Psyr_3055 Psyr_3054 Psyr_3054 Psyr_0822 Psyr_0822 Psyr_3058 Psyr_3058 Psyr_3056 Psyr_3056 Psyr_0821 Psyr_0821 Psyr_3052 Psyr_3052 Psyr_4149 Psyr_4149 GlpD GlpD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3057Transcriptional regulator, DeoR family. (278 aa)    
Predicted Functional Partners:
Psyr_0823
Phosphotransferase system PTS, fructose-specific IIB subunit:PTS fructose IIC component; TC 4.A.2.1.1; TC 4.A.2.1.1.
 
  
 0.848
Psyr_3055
Aminoglycoside phosphotransferase.
 
     0.827
Psyr_3054
Choline/ethanolamine kinase:Aminoglycoside phosphotransferase.
 
     0.819
Psyr_0822
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.813
Psyr_3058
Amidase.
  
    0.796
Psyr_3056
Amidase, hydantoinase/carbamoylase.
  
    0.795
Psyr_0821
Phosphoenolpyruvate-protein phosphotransferase; TC 4.A.2.1.1; Belongs to the PEP-utilizing enzyme family.
 
  
 0.582
Psyr_3052
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.574
Psyr_4149
PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.544
GlpD
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.528
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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