STRINGSTRING
Psyr_3064 Psyr_3064 Psyr_3063 Psyr_3063 Psyr_1794 Psyr_1794 Psyr_3065 Psyr_3065 Psyr_3062 Psyr_3062 Psyr_3061 Psyr_3061 Psyr_3722 Psyr_3722 Psyr_1705 Psyr_1705
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3064Luciferase. (325 aa)    
Predicted Functional Partners:
Psyr_3063
Major facilitator superfamily.
       0.773
Psyr_1794
Amino acid adenylation.
   
 
 0.599
Psyr_3065
Luciferase.
 
    
0.575
Psyr_3062
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.525
Psyr_3061
Putative glutathione S-transferase.
       0.438
Psyr_3722
Amino acid adenylation.
   
 
 0.427
Psyr_1705
Amino acid adenylation.
   
 
 0.418
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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