STRINGSTRING
Psyr_3097 Psyr_3097 Psyr_3094 Psyr_3094 Psyr_3096 Psyr_3096 Psyr_3095 Psyr_3095 Psyr_2931 Psyr_2931 Psyr_0032 Psyr_0032
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3097Peptidase U32. (668 aa)    
Predicted Functional Partners:
Psyr_3094
Periplasmic binding protein.
       0.523
Psyr_3096
ABC transporter.
       0.520
Psyr_3095
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.517
Psyr_2931
High-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.450
Psyr_0032
Conserved hypothetical protein.
  
     0.444
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.