STRINGSTRING
Psyr_3124 Psyr_3124 Psyr_0203 Psyr_0203 Psyr_2287 Psyr_2287 Psyr_0135 Psyr_0135 Psyr_4480 Psyr_4480 Psyr_0875 Psyr_0875 Psyr_1106 Psyr_1106 Psyr_2142 Psyr_2142 Psyr_1414 Psyr_1414 Psyr_4496 Psyr_4496 Psyr_2581 Psyr_2581
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3124TonB-dependent siderophore receptor. (710 aa)    
Predicted Functional Partners:
Psyr_0203
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.764
Psyr_2287
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.733
Psyr_0135
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.726
Psyr_4480
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.713
Psyr_0875
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
 
 
 0.709
Psyr_1106
FecR protein.
 
  
 0.705
Psyr_2142
FecR protein.
 
  
 0.693
Psyr_1414
Cell division and transport-associated protein TolA; TC 2.C.1.2.1.
  
 
 0.669
Psyr_4496
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
  
 
 0.669
Psyr_2581
FecR protein.
 
  
 0.667
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.