Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_2157 | Psyr_3125 | Psyr_2157 | Psyr_3125 | Inosine/uridine-preferring nucleoside hydrolase; Belongs to the IUNH family. | Nicotinamidase. | 0.916 |
Psyr_2157 | Psyr_3685 | Psyr_2157 | Psyr_3685 | Inosine/uridine-preferring nucleoside hydrolase; Belongs to the IUNH family. | Silent information regulator protein Sir2. | 0.904 |
Psyr_3124 | Psyr_3125 | Psyr_3124 | Psyr_3125 | TonB-dependent siderophore receptor. | Nicotinamidase. | 0.510 |
Psyr_3125 | Psyr_2157 | Psyr_3125 | Psyr_2157 | Nicotinamidase. | Inosine/uridine-preferring nucleoside hydrolase; Belongs to the IUNH family. | 0.916 |
Psyr_3125 | Psyr_3124 | Psyr_3125 | Psyr_3124 | Nicotinamidase. | TonB-dependent siderophore receptor. | 0.510 |
Psyr_3125 | Psyr_3126 | Psyr_3125 | Psyr_3126 | Nicotinamidase. | Transporter, putative. | 0.499 |
Psyr_3125 | Psyr_3685 | Psyr_3125 | Psyr_3685 | Nicotinamidase. | Silent information regulator protein Sir2. | 0.909 |
Psyr_3125 | nadE | Psyr_3125 | Psyr_0594 | Nicotinamidase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.575 |
Psyr_3125 | pncB | Psyr_3125 | Psyr_0595 | Nicotinamidase. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.970 |
Psyr_3125 | trmJ | Psyr_3125 | Psyr_1234 | Nicotinamidase. | RNA methyltransferase TrmH, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.428 |
Psyr_3126 | Psyr_3125 | Psyr_3126 | Psyr_3125 | Transporter, putative. | Nicotinamidase. | 0.499 |
Psyr_3685 | Psyr_2157 | Psyr_3685 | Psyr_2157 | Silent information regulator protein Sir2. | Inosine/uridine-preferring nucleoside hydrolase; Belongs to the IUNH family. | 0.904 |
Psyr_3685 | Psyr_3125 | Psyr_3685 | Psyr_3125 | Silent information regulator protein Sir2. | Nicotinamidase. | 0.909 |
Psyr_3685 | nadE | Psyr_3685 | Psyr_0594 | Silent information regulator protein Sir2. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.914 |
nadE | Psyr_3125 | Psyr_0594 | Psyr_3125 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Nicotinamidase. | 0.575 |
nadE | Psyr_3685 | Psyr_0594 | Psyr_3685 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Silent information regulator protein Sir2. | 0.914 |
nadE | pncB | Psyr_0594 | Psyr_0595 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.869 |
pncB | Psyr_3125 | Psyr_0595 | Psyr_3125 | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | Nicotinamidase. | 0.970 |
pncB | nadE | Psyr_0595 | Psyr_0594 | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.869 |
trmJ | Psyr_3125 | Psyr_1234 | Psyr_3125 | RNA methyltransferase TrmH, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | Nicotinamidase. | 0.428 |