STRINGSTRING
Psyr_3196 Psyr_3196 glcB glcB AcnA AcnA GlcF GlcF Psyr_1726 Psyr_1726 Psyr_0147 Psyr_0147 Psyr_1043 Psyr_1043 Psyr_1122 Psyr_1122 Psyr_3331 Psyr_3331 GlcE GlcE allA allA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
Psyr_3196Isocitrate lyase. (441 aa)    
Predicted Functional Partners:
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.994
AcnA
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.918
GlcF
4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224.
     
 0.917
Psyr_1726
Aconitase; Belongs to the aconitase/IPM isomerase family.
     
 0.913
Psyr_0147
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein.
   
 
 0.909
Psyr_1043
Glyoxylate/hydroxypyruvate/2-ketogluconate reductase; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein.
     
 0.908
Psyr_1122
2-keto-3-deoxy-phosphogluconate aldolase.
     
 0.906
Psyr_3331
Glycolate oxidase subunit GlcD.
     
 0.905
GlcE
FAD linked oxidase, N-terminal.
     
 0.905
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
     
 0.808
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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