Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_0238 | Psyr_1585 | Psyr_0238 | Psyr_1585 | Helix-turn-helix motif protein. | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | 0.496 |
Psyr_0238 | Psyr_1794 | Psyr_0238 | Psyr_1794 | Helix-turn-helix motif protein. | Amino acid adenylation. | 0.568 |
Psyr_0238 | Psyr_1945 | Psyr_0238 | Psyr_1945 | Helix-turn-helix motif protein. | Non-ribosomal peptide synthase:Amino acid adenylation. | 0.505 |
Psyr_0238 | Psyr_2445 | Psyr_0238 | Psyr_2445 | Helix-turn-helix motif protein. | Multi-sensor hybrid histidine kinase. | 0.552 |
Psyr_0238 | Psyr_3250 | Psyr_0238 | Psyr_3250 | Helix-turn-helix motif protein. | Helix-turn-helix motif protein. | 0.490 |
Psyr_1585 | Psyr_0238 | Psyr_1585 | Psyr_0238 | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | Helix-turn-helix motif protein. | 0.496 |
Psyr_1585 | Psyr_1794 | Psyr_1585 | Psyr_1794 | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | Amino acid adenylation. | 0.718 |
Psyr_1585 | Psyr_1945 | Psyr_1585 | Psyr_1945 | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | Non-ribosomal peptide synthase:Amino acid adenylation. | 0.616 |
Psyr_1585 | Psyr_2445 | Psyr_1585 | Psyr_2445 | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | Multi-sensor hybrid histidine kinase. | 0.999 |
Psyr_1585 | Psyr_3250 | Psyr_1585 | Psyr_3250 | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | Helix-turn-helix motif protein. | 0.511 |
Psyr_1585 | Psyr_3645 | Psyr_1585 | Psyr_3645 | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | Prephenate dehydratase. | 0.564 |
Psyr_1794 | Psyr_0238 | Psyr_1794 | Psyr_0238 | Amino acid adenylation. | Helix-turn-helix motif protein. | 0.568 |
Psyr_1794 | Psyr_1585 | Psyr_1794 | Psyr_1585 | Amino acid adenylation. | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | 0.718 |
Psyr_1794 | Psyr_1945 | Psyr_1794 | Psyr_1945 | Amino acid adenylation. | Non-ribosomal peptide synthase:Amino acid adenylation. | 0.999 |
Psyr_1794 | Psyr_2445 | Psyr_1794 | Psyr_2445 | Amino acid adenylation. | Multi-sensor hybrid histidine kinase. | 0.795 |
Psyr_1794 | Psyr_3250 | Psyr_1794 | Psyr_3250 | Amino acid adenylation. | Helix-turn-helix motif protein. | 0.578 |
Psyr_1794 | Psyr_3645 | Psyr_1794 | Psyr_3645 | Amino acid adenylation. | Prephenate dehydratase. | 0.632 |
Psyr_1945 | Psyr_0238 | Psyr_1945 | Psyr_0238 | Non-ribosomal peptide synthase:Amino acid adenylation. | Helix-turn-helix motif protein. | 0.505 |
Psyr_1945 | Psyr_1585 | Psyr_1945 | Psyr_1585 | Non-ribosomal peptide synthase:Amino acid adenylation. | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | 0.616 |
Psyr_1945 | Psyr_1794 | Psyr_1945 | Psyr_1794 | Non-ribosomal peptide synthase:Amino acid adenylation. | Amino acid adenylation. | 0.999 |
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