STRINGSTRING
Psyr_3250 Psyr_3250 Psyr_3249 Psyr_3249 Psyr_3251 Psyr_3251 Psyr_1794 Psyr_1794 guaA guaA Psyr_2920 Psyr_2920 Psyr_3645 Psyr_3645 Psyr_1585 Psyr_1585 Psyr_0238 Psyr_0238 Psyr_1945 Psyr_1945 Psyr_2445 Psyr_2445
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3250Helix-turn-helix motif protein. (189 aa)    
Predicted Functional Partners:
Psyr_3249
Conserved hypothetical protein.
       0.675
Psyr_3251
Protein of unknown function DUF6.
 
  
 0.649
Psyr_1794
Amino acid adenylation.
  
  
 0.578
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.537
Psyr_2920
Transcriptional regulator, GntR family.
 
  
 0.533
Psyr_3645
Prephenate dehydratase.
  
  
 0.519
Psyr_1585
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.
     
 0.511
Psyr_0238
Helix-turn-helix motif protein.
 
 
 0.490
Psyr_1945
Non-ribosomal peptide synthase:Amino acid adenylation.
  
  
 0.481
Psyr_2445
Multi-sensor hybrid histidine kinase.
  
  
 0.479
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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