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Psyr_3337 Psyr_3337 Psyr_2989 Psyr_2989 pgl pgl edd edd Psyr_0764 Psyr_0764 Psyr_2235 Psyr_2235 Psyr_1043 Psyr_1043 Psyr_2494 Psyr_2494 Psyr_3338 Psyr_3338 rpiA rpiA Psyr_3336 Psyr_3336
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
Psyr_3337Gluconate kinase, SKI family. (175 aa)    
Predicted Functional Partners:
Psyr_2989
6-phosphogluconate dehydrogenase (decarboxylating).
  
 0.993
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
 
 0.948
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.939
Psyr_0764
Gluconolactonase.
    
 0.906
Psyr_2235
Gluconolactonase.
    
 0.906
Psyr_1043
Glyoxylate/hydroxypyruvate/2-ketogluconate reductase; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein.
    
 0.903
Psyr_2494
Conserved hypothetical protein.
     
 0.901
Psyr_3338
Gluconate permease GntT; TC 2.A.8.1.4.
 
  
 0.737
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.730
Psyr_3336
Transcriptional regulator, LacI family.
 
 
 0.721
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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