STRINGSTRING
Psyr_3510 Psyr_3510 Psyr_3509 Psyr_3509 Psyr_3507 Psyr_3507 Psyr_3508 Psyr_3508 Psyr_3506 Psyr_3506 Psyr_3512 Psyr_3512 Psyr_3511 Psyr_3511 Psyr_4820 Psyr_4820 Psyr_3504 Psyr_3504
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3510Conserved hypothetical protein. (87 aa)    
Predicted Functional Partners:
Psyr_3509
Cytochrome B561, bacterial.
 
     0.947
Psyr_3507
Membrane protein, putative.
       0.685
Psyr_3508
Glycosyl hydrolase, BNR repeat protein.
       0.685
Psyr_3506
Sulfatase.
       0.655
Psyr_3512
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal.
       0.562
Psyr_3511
Response regulator receiver:Transcriptional regulatory protein, C-terminal.
       0.557
Psyr_4820
Conserved hypothetical protein.
  
     0.424
Psyr_3504
GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal.
 
     0.417
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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