Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_1290 | Psyr_1291 | Psyr_1290 | Psyr_1291 | Homoserine dehydrogenase. | L-threonine synthase. | 0.976 |
Psyr_1290 | Psyr_1660 | Psyr_1290 | Psyr_1660 | Homoserine dehydrogenase. | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.776 |
Psyr_1290 | Psyr_3555 | Psyr_1290 | Psyr_3555 | Homoserine dehydrogenase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.871 |
Psyr_1290 | Psyr_3645 | Psyr_1290 | Psyr_3645 | Homoserine dehydrogenase. | Prephenate dehydratase. | 0.743 |
Psyr_1290 | argG | Psyr_1290 | Psyr_3892 | Homoserine dehydrogenase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.449 |
Psyr_1290 | asd | Psyr_1290 | Psyr_1986 | Homoserine dehydrogenase. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.963 |
Psyr_1291 | Psyr_1290 | Psyr_1291 | Psyr_1290 | L-threonine synthase. | Homoserine dehydrogenase. | 0.976 |
Psyr_1291 | Psyr_1660 | Psyr_1291 | Psyr_1660 | L-threonine synthase. | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.497 |
Psyr_1291 | Psyr_3555 | Psyr_1291 | Psyr_3555 | L-threonine synthase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.826 |
Psyr_1291 | Psyr_3645 | Psyr_1291 | Psyr_3645 | L-threonine synthase. | Prephenate dehydratase. | 0.582 |
Psyr_1291 | argG | Psyr_1291 | Psyr_3892 | L-threonine synthase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.560 |
Psyr_1291 | asd | Psyr_1291 | Psyr_1986 | L-threonine synthase. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.497 |
Psyr_1660 | Psyr_1290 | Psyr_1660 | Psyr_1290 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Homoserine dehydrogenase. | 0.776 |
Psyr_1660 | Psyr_1291 | Psyr_1660 | Psyr_1291 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | L-threonine synthase. | 0.497 |
Psyr_1660 | Psyr_3555 | Psyr_1660 | Psyr_3555 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.884 |
Psyr_1660 | Psyr_3645 | Psyr_1660 | Psyr_3645 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Prephenate dehydratase. | 0.522 |
Psyr_1660 | argG | Psyr_1660 | Psyr_3892 | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.432 |
Psyr_3555 | Psyr_1290 | Psyr_3555 | Psyr_1290 | Aspartate kinase; Belongs to the aspartokinase family. | Homoserine dehydrogenase. | 0.871 |
Psyr_3555 | Psyr_1291 | Psyr_3555 | Psyr_1291 | Aspartate kinase; Belongs to the aspartokinase family. | L-threonine synthase. | 0.826 |
Psyr_3555 | Psyr_1660 | Psyr_3555 | Psyr_1660 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.884 |
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