STRINGSTRING
Psyr_3571 Psyr_3571 Psyr_3570 Psyr_3570 Psyr_3569 Psyr_3569 Psyr_3567 Psyr_3567 Psyr_0357 Psyr_0357 Psyr_2505 Psyr_2505 Psyr_2943 Psyr_2943 Psyr_2963 Psyr_2963 Psyr_0973 Psyr_0973 Psyr_2504 Psyr_2504 Psyr_3875 Psyr_3875
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3571L-arginine-binding protein / L-ornithine-binding protein. (258 aa)    
Predicted Functional Partners:
Psyr_3570
L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein.
 0.983
Psyr_3569
L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein.
 
 0.982
Psyr_3567
L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein.
 
 
 0.977
Psyr_0357
Diaminopimelate ABC transporter membrane protein.
 
 0.944
Psyr_2505
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
 0.936
Psyr_2943
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
   0.918
Psyr_2963
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 
 0.849
Psyr_0973
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
 
 0.847
Psyr_2504
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 
 0.845
Psyr_3875
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 
 0.827
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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