node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_3579 | rplD | Psyr_3579 | Psyr_4547 | Class I peptide chain release factor. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.827 |
Psyr_3579 | rplM | Psyr_3579 | Psyr_4120 | Class I peptide chain release factor. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.815 |
Psyr_3579 | rplT | Psyr_3579 | Psyr_2165 | Class I peptide chain release factor. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.815 |
Psyr_3579 | rplU | Psyr_3579 | Psyr_0701 | Class I peptide chain release factor. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.906 |
Psyr_3579 | rpmA | Psyr_3579 | Psyr_0702 | Class I peptide chain release factor. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.862 |
Psyr_3579 | rpsF | Psyr_3579 | Psyr_0581 | Class I peptide chain release factor. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.808 |
Psyr_3579 | rpsG | Psyr_3579 | Psyr_4552 | Class I peptide chain release factor. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.842 |
Psyr_3579 | rpsL | Psyr_3579 | Psyr_4553 | Class I peptide chain release factor. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.843 |
Psyr_3579 | rpsN | Psyr_3579 | Psyr_4535 | Class I peptide chain release factor. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.814 |
Psyr_3579 | rpsP | Psyr_3579 | Psyr_1282 | Class I peptide chain release factor. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.854 |
rplD | Psyr_3579 | Psyr_4547 | Psyr_3579 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Class I peptide chain release factor. | 0.827 |
rplD | rplM | Psyr_4547 | Psyr_4120 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.996 |
rplD | rplT | Psyr_4547 | Psyr_2165 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.992 |
rplD | rplU | Psyr_4547 | Psyr_0701 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.984 |
rplD | rpmA | Psyr_4547 | Psyr_0702 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.989 |
rplD | rpsF | Psyr_4547 | Psyr_0581 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.982 |
rplD | rpsG | Psyr_4547 | Psyr_4552 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
rplD | rpsL | Psyr_4547 | Psyr_4553 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.998 |
rplD | rpsN | Psyr_4547 | Psyr_4535 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.998 |
rplD | rpsP | Psyr_4547 | Psyr_1282 | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.982 |