Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_1297 | Psyr_3631 | Psyr_1297 | Psyr_3631 | YaeQ. | GreA/GreB family elongation factor. | 0.439 |
Psyr_2346 | Psyr_3631 | Psyr_2346 | Psyr_3631 | Conserved hypothetical protein. | GreA/GreB family elongation factor. | 0.411 |
Psyr_3629 | Psyr_3630 | Psyr_3629 | Psyr_3630 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.566 |
Psyr_3629 | Psyr_3631 | Psyr_3629 | Psyr_3631 | Conserved hypothetical protein. | GreA/GreB family elongation factor. | 0.566 |
Psyr_3629 | efp | Psyr_3629 | Psyr_3628 | Conserved hypothetical protein. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.982 |
Psyr_3630 | Psyr_3629 | Psyr_3630 | Psyr_3629 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.566 |
Psyr_3630 | Psyr_3631 | Psyr_3630 | Psyr_3631 | Conserved hypothetical protein. | GreA/GreB family elongation factor. | 0.795 |
Psyr_3630 | Psyr_3632 | Psyr_3630 | Psyr_3632 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.514 |
Psyr_3630 | efp | Psyr_3630 | Psyr_3628 | Conserved hypothetical protein. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.428 |
Psyr_3631 | Psyr_1297 | Psyr_3631 | Psyr_1297 | GreA/GreB family elongation factor. | YaeQ. | 0.439 |
Psyr_3631 | Psyr_2346 | Psyr_3631 | Psyr_2346 | GreA/GreB family elongation factor. | Conserved hypothetical protein. | 0.411 |
Psyr_3631 | Psyr_3629 | Psyr_3631 | Psyr_3629 | GreA/GreB family elongation factor. | Conserved hypothetical protein. | 0.566 |
Psyr_3631 | Psyr_3630 | Psyr_3631 | Psyr_3630 | GreA/GreB family elongation factor. | Conserved hypothetical protein. | 0.795 |
Psyr_3631 | Psyr_3632 | Psyr_3631 | Psyr_3632 | GreA/GreB family elongation factor. | Conserved hypothetical protein. | 0.514 |
Psyr_3631 | efp | Psyr_3631 | Psyr_3628 | GreA/GreB family elongation factor. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.493 |
Psyr_3631 | rpoA | Psyr_3631 | Psyr_4524 | GreA/GreB family elongation factor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.587 |
Psyr_3631 | rpoB | Psyr_3631 | Psyr_4555 | GreA/GreB family elongation factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.597 |
Psyr_3631 | rpoC | Psyr_3631 | Psyr_4554 | GreA/GreB family elongation factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.676 |
Psyr_3631 | rpoZ | Psyr_3631 | Psyr_0210 | GreA/GreB family elongation factor. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.651 |
Psyr_3632 | Psyr_3630 | Psyr_3632 | Psyr_3630 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.514 |
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