STRINGSTRING
Psyr_3635 Psyr_3635 Psyr_1632 Psyr_1632 Psyr_0796 Psyr_0796 queF queF Psyr_3636 Psyr_3636 Psyr_0886 Psyr_0886 Psyr_4688 Psyr_4688 Psyr_0797 Psyr_0797 Psyr_1513 Psyr_1513 Psyr_3150 Psyr_3150 Psyr_0197 Psyr_0197
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_3635Competence protein ComEA helix-hairpin-helix region. (120 aa)    
Predicted Functional Partners:
Psyr_1632
ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.671
Psyr_0796
Type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.646
queF
GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
     
 0.561
Psyr_3636
Polysaccharide biosynthesis protein CapD.
       0.522
Psyr_0886
Response regulator receiver.
  
    0.494
Psyr_4688
Phosphoribosyltransferase.
  
  
 0.493
Psyr_0797
Type II secretion system protein.
  
  
 0.490
Psyr_1513
Type II secretion system protein.
  
  
 0.490
Psyr_3150
Type II secretion system protein.
  
  
 0.490
Psyr_0197
Mg chelatase-related protein.
  
  
 0.441
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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